Get Pathways by Ontology Term — getPathwaysByOntologyTerm • rWikiPathways
Description: Retrieve pathway information for every pathway with a given ontology term.

# Get Pathways by Ontology Term

Source: `R/getOntologyTerms.R`
`getPathwaysByOntologyTerm.Rd`

Retrieve pathway information for every pathway with a given ontology term.

    getPathwaysByOntologyTerm(term)

## Arguments

term | (`character`) Official name of ontology term, e.g., "PW:0000045"

## Value

A `list` of pathway information, including WPID, url, name, species and revision

## Examples

    {
    getPathwaysByOntologyTerm('PW:0000045')
    }
    #> [[1]]
    #> [[1]]$id
    #> [1] "WP134"
    #>
    #> [[1]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP134"
    #>
    #> [[1]]$name
    #> [1] "Pentose Phosphate Metabolism"
    #>
    #> [[1]]$species
    #> [1] "Homo sapiens"
    #>
    #> [[1]]$revision
    #> [1] "114260"
    #>
    #>
    #> [[2]]
    #> [[2]]$id
    #> [1] "WP122"
    #>
    #> [[2]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP122"
    #>
    #> [[2]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[2]]$species
    #> [1] "Danio rerio"
    #>
    #> [[2]]$revision
    #> [1] "82860"
    #>
    #>
    #> [[3]]
    #> [[3]]$id
    #> [1] "WP134"
    #>
    #> [[3]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP134"
    #>
    #> [[3]]$name
    #> [1] "Pentose Phosphate Metabolism"
    #>
    #> [[3]]$species
    #> [1] "Homo sapiens"
    #>
    #> [[3]]$revision
    #> [1] "114260"
    #>
    #>
    #> [[4]]
    #> [[4]]$id
    #> [1] "WP282"
    #>
    #> [[4]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP282"
    #>
    #> [[4]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[4]]$species
    #> [1] "Rattus norvegicus"
    #>
    #> [[4]]$revision
    #> [1] "113975"
    #>
    #>
    #> [[5]]
    #> [[5]]$id
    #> [1] "WP312"
    #>
    #> [[5]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP312"
    #>
    #> [[5]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[5]]$species
    #> [1] "Caenorhabditis elegans"
    #>
    #> [[5]]$revision
    #> [1] "68457"
    #>
    #>
    #> [[6]]
    #> [[6]]$id
    #> [1] "WP369"
    #>
    #> [[6]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP369"
    #>
    #> [[6]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[6]]$species
    #> [1] "Saccharomyces cerevisiae"
    #>
    #> [[6]]$revision
    #> [1] "96415"
    #>
    #>
    #> [[7]]
    #> [[7]]$id
    #> [1] "WP421"
    #>
    #> [[7]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP421"
    #>
    #> [[7]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[7]]$species
    #> [1] "Drosophila melanogaster"
    #>
    #> [[7]]$revision
    #> [1] "111041"
    #>
    #>
    #> [[8]]
    #> [[8]]$id
    #> [1] "WP63"
    #>
    #> [[8]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP63"
    #>
    #> [[8]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[8]]$species
    #> [1] "Mus musculus"
    #>
    #> [[8]]$revision
    #> [1] "111179"
    #>
    #>
    #> [[9]]
    #> [[9]]$id
    #> [1] "WP670"
    #>
    #> [[9]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP670"
    #>
    #> [[9]]$name
    #> [1] "Pentose Phosphate Pathway 2"
    #>
    #> [[9]]$species
    #> [1] "Saccharomyces cerevisiae"
    #>
    #> [[9]]$revision
    #> [1] "107029"
    #>
    #>
    #> [[10]]
    #> [[10]]$id
    #> [1] "WP1147"
    #>
    #> [[10]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP1147"
    #>
    #> [[10]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[10]]$species
    #> [1] "Canis familiaris"
    #>
    #> [[10]]$revision
    #> [1] "106050"
    #>
    #>
    #> [[11]]
    #> [[11]]$id
    #> [1] "WP1231"
    #>
    #> [[11]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP1231"
    #>
    #> [[11]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[11]]$species
    #> [1] "Anopheles gambiae"
    #>
    #> [[11]]$revision
    #> [1] "105893"
    #>
    #>
    #> [[12]]
    #> [[12]]$id
    #> [1] "WP1684"
    #>
    #> [[12]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP1684"
    #>
    #> [[12]]$name
    #> [1] ""
    #>
    #> [[12]]$species
    #> [1] ""
    #>
    #> [[12]]$revision
    #> [1] 0
    #>
    #>
    #> [[13]]
    #> [[13]]$id
    #> [1] "WP797"
    #>
    #> [[13]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP797"
    #>
    #> [[13]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[13]]$species
    #> [1] "Gallus gallus"
    #>
    #> [[13]]$revision
    #> [1] "109463"
    #>
    #>
    #> [[14]]
    #> [[14]]$id
    #> [1] "WP911"
    #>
    #> [[14]]$url
    #> [1] "https://www.wikipathways.org/index.php/Pathway:WP911"
    #>
    #> [[14]]$name
    #> [1] "Pentose Phosphate Pathway"
    #>
    #> [[14]]$species
    #> [1] "Pan troglodytes"
    #>
    #> [[14]]$revision
    #> [1] "106933"
    #>
    #>